WebIntroduction to ATAC-Seq data analysis. Video slides Plain-text slides. WebJun 14, 2024 · After the preprocessing step that eliminates duplicate reads and low mapping quality reads, the main HMMRATAC pipeline (Figure 1B) begins by separating the ATAC-seq signal into four components, each representing a unique feature.These features are nucleosome-free regions (NFRs), which are most likely to occur within the open …
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